Binning metagenomic contigs by coverage and composition
- Submitting institution
-
University of Glasgow
- Unit of assessment
- 12 - Engineering
- Output identifier
- 12-01446
- Type
- D - Journal article
- DOI
-
10.1038/NMETH.3103
- Title of journal
- Nature Methods
- Article number
- -
- First page
- 1144
- Volume
- 11
- Issue
- 11
- ISSN
- 1548-7091
- Open access status
- Out of scope for open access requirements
- Month of publication
- -
- Year of publication
- 2014
- URL
-
http://eprints.gla.ac.uk/104035/
- Supplementary information
-
-
- Request cross-referral to
- -
- Output has been delayed by COVID-19
- No
- COVID-19 affected output statement
- -
- Forensic science
- No
- Criminology
- No
- Interdisciplinary
- No
- Number of additional authors
-
9
- Research group(s)
-
-
- Proposed double-weighted
- No
- Reserve for an output with double weighting
- No
- Additional information
- This paper was an output from an EU Cost Action (ES1103) on the recovery and sequencing of microbial genomes from mixed microbial community samples, ensuring the accelerated uptake of the bioinformatic algorithms, placed in the CONCOCT software (e.g. by environmental engineers doi.org/10.1038/nbt.3704 and clinicians doi.org/10.1126/sciadv.1500183. The work led to an NERC grant (NE/P003826/1, http://gotw.nerc.ac.uk/list_full.asp?pcode=NE%2FP003826%2F1&cookieConsent=A, £141,110) on combining metagenomics with microfluidics, and invited talks at Earlham Institute, MRC Centre for Medical Mycology, and Biocity Finland. The software was subsequently incorporated in Anvi'o open-source platform (PeerJ 2015: doi.org/10.7717/peerj.1319) for 'omic data, managed by University of Chicago (https://merenlab.org/software/anvio/).
- Author contribution statement
- -
- Non-English
- No
- English abstract
- -
