ProteoAnnotator - Open source proteogenomics annotation software supporting PSI standards
- Submitting institution
-
Liverpool John Moores University
- Unit of assessment
- 11 - Computer Science and Informatics
- Output identifier
- 1003
- Type
- D - Journal article
- DOI
-
10.1002/pmic.201400265
- Title of journal
- PROTEOMICS
- Article number
- -
- First page
- 2731
- Volume
- 14
- Issue
- 23-24
- ISSN
- 1615-9853
- Open access status
- Out of scope for open access requirements
- Month of publication
- October
- Year of publication
- 2014
- URL
-
-
- Supplementary information
-
-
- Request cross-referral to
- -
- Output has been delayed by COVID-19
- No
- COVID-19 affected output statement
- -
- Forensic science
- No
- Criminology
- No
- Interdisciplinary
- Yes
- Number of additional authors
-
6
- Research group(s)
-
-
- Citation count
- 31
- Proposed double-weighted
- No
- Reserve for an output with double weighting
- No
- Additional information
- Based on previous BBSRC grants (e.g., BB/L024128/1, £206k, 06/2014 - 12/2016) to develop proteomics tools and standards, a resulting tool ProteoAnnotator incorporates a graphical user interface and implements the PSI mzIdentML standard for each analysis stage. The new tool is intended for pre‐processing and combining multiple search databases, to perform peptide‐level statistics on mzIdentML files - for scoring grouped protein identifications matched to a given genomic locus to validate that updates to the official gene models are statistically sound, and for mapping end results back onto the genome.
- Author contribution statement
- -
- Non-English
- No
- English abstract
- -
